I'll add my story if only to help you figure out your problem.
I bought a new Springfield Ronin in 10mm and went to shoot it for the first time. I took along a couple boxes of factory ammo and proceeded to have fun. No fun was had as it would not extract the fired case every time. It quickly turned into a single shot 1911 with a manual extractor, me.
I returned home and scrubbed it down, dug out some different mags, went back to the range and of course, had the same problems. Once back home I took the barrel out of the Ronin and a RIA 1911 in 10mm and inserted a live round into the chambers. The round fell flush into the RIA but stood proud out of the Ronin. I tried this with I think with 4 different brands of factory 10mm and only one would fit flush in the Ronin with all fitting flush in the RIA.
The only reason I never took any of that ammo to the range was at the time I only had a single box of each and didn't want to shoot it yet as 10mm was hard to find.
I ended up contacting S.A. and sending it back. They were most helpful and when I got it back they had reamed the chamber and installed a new extractor. It shoots everything I put in it now. I guess my point is that your issue could be something similar to my problem.
I bought a new Springfield Ronin in 10mm and went to shoot it for the first time. I took along a couple boxes of factory ammo and proceeded to have fun. No fun was had as it would not extract the fired case every time. It quickly turned into a single shot 1911 with a manual extractor, me.
I returned home and scrubbed it down, dug out some different mags, went back to the range and of course, had the same problems. Once back home I took the barrel out of the Ronin and a RIA 1911 in 10mm and inserted a live round into the chambers. The round fell flush into the RIA but stood proud out of the Ronin. I tried this with I think with 4 different brands of factory 10mm and only one would fit flush in the Ronin with all fitting flush in the RIA.
The only reason I never took any of that ammo to the range was at the time I only had a single box of each and didn't want to shoot it yet as 10mm was hard to find.
I ended up contacting S.A. and sending it back. They were most helpful and when I got it back they had reamed the chamber and installed a new extractor. It shoots everything I put in it now. I guess my point is that your issue could be something similar to my problem.