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Since they all pretty much work just fine, you have choices..........
All of the side-mounted receiver peep sights like Williams 5D-336 or FP-336, the Lyman, etc will usually zero using the issue height front sight - as will the William's pair made for top-mounting on Marlins that are not prepped (2 D/T holes) on the upper rear LH receiver wall.
OTOH, all other top-mounted receiver peep sights (Skinner, Williams WGRS, XS, etc), because they have a higher line-of-sight than side mounts, will also require a new front sight blade that's at least 1/10" higher than the issue front sight, in order to zero the rifle.
With whatever receiver peep sight, though, don't forget to remove the rear bbl open/iron sight (for a clean sight picture) & replace it with a dovertail filler blank, bought or made.
A 3rd choice, however, would be to switch out your rifle's rear bbl open sight for a folder, and mount a tang peep sight, thereby allowing you two different zeroes: a short range zero for the bbl sights, and a longer range zero for the tanger. (It's E-Z to hunt the bbl sight, then switch to the tanger for a long shot)
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